Popenda, Mariusz: search on Z-Library

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1

New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation

Antczak, Maciej, Popenda, Mariusz, Zok, Tomasz, Zurkowski, Michal, Adamiak, Ryszard W, Szachniuk, Marta

Journal:

Year:

2017

Language:

english

File:

PDF, 768 KB

english, 2017

2

The Solution NMR Structure of 2'-O-Methyl CGCGCG RNA Duplex

Popenda, Mariusz, Milecki, Jan, Biała, Ewa, Adamiak, Ryszard

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

1995

Language:

english

File:

PDF, 166 KB

english, 1995

3

New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure

Antczak, Maciej, Popenda, Mariusz, Zok, Tomasz, Sarzynska, Joanna, Ratajczak, Tomasz, Tomczyk, Katarzyna, Adamiak, Ryszard W., Szachniuk, Marta

Journal:

Acta Biochimica Polonica

Year:

2016

File:

PDF, 3.59 MB

2016

4

Prediction of hammerhead ribozyme intracellular activity with the catalytic core fingerprint

Gabryelska, Marta Magdalena, Wyszko, Eliza, Szymański, Maciej, Popenda, Mariusz, Barciszewski, Jan

Journal:

Biochemical Journal

Year:

2013

Language:

english

File:

PDF, 1.78 MB

english, 2013

5

A new, efficient entry to nucleoside 2′,3′-O,O-cyclophosphorothioates

Jadwiga Jankowska, Małgorzata Wenska, Mariusz Popenda, Jacek Stawiński, Adam Kraszewski

Journal:

Tetrahedron Letters

Year:

2000

Language:

english

File:

PDF, 66 KB

english, 2000

6

Topology-based classification of tetrads and quadruplex structures

Popenda, Mariusz, Miskiewicz, Joanna, Sarzynska, Joanna, Zok , Tomasz, Szachniuk, Marta, Valencia, Alfonso

Journal:

Year:

2019

Language:

english

File:

PDF, 549 KB

english, 2019

7

An Efficient Route to Novel 4,5‐Di‐ and 2,4,5‐Tri Substituted Imidazoles from Imidazo[1,5‐ a ]‐1,3,5‐triazine (5,8‐Diaza‐7,9‐dideazapurine) Derivatives

Golankiewicz, Bozenna, Januszczyk, Piotr, Zeidler, Joanna, Popenda, Mariusz

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2004

Language:

english

File:

PDF, 303 KB

english, 2004

8

2-Methylwyosine, a Nucleoside With Restricted Anti Conformation in the East Region Enforced by Nucleobase Moiety Modification: Synthesis and Conformational Analysis by NMR and Molecular Dynamics

Baranowski, Daniel, Golankiewicz, Bozenna, Folkman, Wojciech, Popenda, Mariusz

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2012

Language:

english

File:

PDF, 361 KB

english, 2012

9

Four coumarins isolated from seeds of Lupinus angustifolius

MacieJ Stobiecki, Mariusz Popenda, Krzysztof Gulewicz

Journal:

Biochemical Systematics and Ecology

Year:

1993

Language:

english

File:

PDF, 59 KB

english, 1993

10

RNApdbee 2.0: multifunctional tool for RNA structure annotation

Zok, Tomasz, Antczak, Maciej, Zurkowski, Michal, Popenda, Mariusz, Blazewicz, Jacek, Adamiak, Ryszard W, Szachniuk, Marta

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 959 KB

english, 2018

11

ElTetrado: a tool for identification and classification of tetrads and quadruplexes

Zok, Tomasz, Popenda, Mariusz, Szachniuk, Marta

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 823 KB

2020

12

[IEEE 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Nashville, TN, USA (2009.03.30-2009.04.2)] 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology - An assignment walk through 3D NMR spectrum

Szachniuk, Marta, Popenda, Mariusz, Adamiak, Ryszard W., Blazewicz, Jacek

Year:

2009

Language:

english

File:

PDF, 1.50 MB

english, 2009

13

Flavan-3-ols from seeds ofLupinus angustifolius

Maciej Stobiecki, Mariusz Popenda

Journal:

Year:

1994

Language:

english

File:

PDF, 444 KB

english, 1994

14

An Efficient Route to Novel 4,5-Di- and 2,4,5-Tri-Substituted Imidazoles from Imidazo[1,5-a]-1,3,5-triazine (5,8-Diaza-7,9-dideazapurine) Derivatives.

Bozenna Golankiewicz, Piotr Januszczyk, Joanna Zeidler, Mariusz Popenda

Journal:

Year:

2004

File:

PDF, 114 KB

2004

15

MCQ4Structures to compute similarity of molecule structures

Zok, Tomasz, Popenda, Mariusz, Szachniuk, Marta

Journal:

Central European Journal of Operations Research

Year:

2014

Language:

english

File:

PDF, 714 KB

english, 2014

16

Determination of the tautomerism of 5,5-disubstituted analogues of 6-amino-2-thiouracil by 1H and 13C nuclear magnetic resonance spectroscopy

Golankiewicz, Bozenna, Zeidler, Joanna, Popenda, Mariusz

Journal:

Journal of the Chemical Society Perkin Transactions 2

Year:

1990

Language:

english

File:

PDF, 447 KB

english, 1990

17

New in silico approach to assessing RNA secondary structures with non-canonical base pairs

Rybarczyk, Agnieszka, Szostak, Natalia, Antczak, Maciej, Zok, Tomasz, Popenda, Mariusz, Adamiak, Ryszard, Blazewicz, Jacek, Szachniuk, Marta

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 1.50 MB

english, 2015

18

A new molecular mechanism of RNA circularization and the microRNA sponge formation

Belter, Agnieszka, Popenda, Mariusz, Sajek, Marcin, WoÅºniak, Tomasz, NaskrÄt-Barciszewska, MirosÅawa Z., Szachniuk, Marta, Jurga, Stefan, Barciszewski, Jan

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2020

File:

PDF, 2.98 MB

2020

19

RNA FRABASE 2.0: an advanced web-accessible database with the capacity to search the three-dimensional fragments within RNA structures

Mariusz Popenda, Marta Szachniuk, Marek Blazewicz, Szymon Wasik, Edmund K Burke, Jacek Blazewicz, Ryszard W Adamiak

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 5.56 MB

english, 2010

20

RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures

Antczak, Maciej, Zok, Tomasz, Osowiecki, Maciej, Popenda, Mariusz, Adamiak, Ryszard W., Szachniuk, Marta

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 2.33 MB

english, 2018

21

ChemInform Abstract: A New, Efficient Entry to Nucleoside 2′,3′-O,O-Cyclophosphorothioates.

Jadwiga Jankowska, Malgorzata Wenska, Mariusz Popenda, Jacek Stawinski, Adam Kraszewski

Journal:

Year:

2000

File:

PDF, 29 KB

2000

22

New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure

Antczak, Maciej, Popenda, Mariusz, Zok, Tomasz, Sarzynska, Joanna, Ratajczak, Tomasz, Tomczyk, Katarzyna, Adamiak, Ryszard W., Szachniuk, Marta

Journal:

Acta Biochimica Polonica

Year:

2016

Language:

english

File:

PDF, 3.59 MB

english, 2016

23

RNAssess—a web server for quality assessment of RNA 3D structures

Lukasiak, Piotr, Antczak, Maciej, Ratajczak, Tomasz, Szachniuk, Marta, Popenda, Mariusz, Adamiak, Ryszard W., Blazewicz, Jacek

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 1.43 MB

english, 2015

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